Browse of TCMCG051C51631 protein

CDS

Accession Number	TCMCG051C51631
gbkey	CDS
Protein Id	YP_001109490.1
Location	complement(join(19793..21409,22189..22641))
Gene	rpoC1
GeneID	4929644
Organism	Populus trichocarpa
locus_tag	Poptr_cp011

Protein

Length	689aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	Project:17973, BioProject:PRJNA17973
db_source	NC_009143.1
Definition	RNA polymerase beta' subunit (chloroplast) [Populus trichocarpa]
Locus_tag	Poptr_cp011

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA-directed RNA polymerase
KEGG_TC	-
KEGG_Module	M00183        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K03046        [VIEW IN KEGG]
EC	2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0009295        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAATCAGAATTTTTCTTCTATGATCGATCGGTATAAACATCAACAACTCCGAATTGGATCAGTTTCGCCTCAACAAATAAGTGCTTGGACTAATAAAATCCTACCTAATGGAGAGATTGTTGGAGAGGTTACAAAACCCTATACTTTTCATTACAAAACTAATAAACCTGAAAAAGATGGATTATTTTGTGAAAGAATTTTTGGGCCTATAAAAAGTGGAATTTGTGCTTGTGGAAATTATCGAGTAATTGGCGATGAAAAAGAAGAACCAAAATTTTGTGAACAATGCGGGGTCGAATTTGTTGATTCTCGGATACGAAGATATCAAATGGGCTACATCAAACTGGCATGCCCAGTAACTCATGTGTGGTATTTGAAACGTCTTCCTAGTTATATCGCCAATCTTTTAGATAAACCTCTTAAACAATTAGAAGGCTTAGTATACTGCGATTTTTCTTTTGCTAGGCCCATAGCCAAAAAACCTACTTTCTTACGATTACGAGGTTCGTTCGAATATGAAATACAATCTTGGAAATACAGTATTCCGCTTTTTTTTACTACCCAAGGGTTCGATACATTTCGAAATCGAGAAATTTCTACTGGAGCTGGTGCTATCCGAGAACTATTAGCCGATCTGGATTTGCGAATTATTCTAGATTATTCGTCGTTAGAATGGAAAGAATTAGGGGAAGAAGGACCCACCGGGAATGAATGGGAAGATCGAAAAGTTGGAAGAAGAAAGGATTTTTTAGTTAGACGCGTGGAATTAGCTAAGCATTTTATTCGAACAAATATAGAACCAGAATGGATGGTTTTATGTCTATTACCAGTTCTTCCTCCCGAATTGAGACCCATCATTCAGATAGATGGAGGTAAACTAATGAGTTCAGATATTAATGAACTCTATAGAAGAGTTATTTATCGGAACAATACTCTTACGGATCTATTAACAACAAGTAGATCTACGCCAGGGGAATTAGTAATGTGTCAGGAGAAATTGGTACAAGAAGCCGTAGATACACTTCTTGATAATGGAATCCGCGGACAACCAATGAGAGACGGTCATAATAAGGTTTACAAGTCGTTTTCAGATGTAATTGAAGGCAAAGAGGGAAGGTTTCGTGAGACTATGCTTGGCAAACGGGTTGATTATTCGGGGCGTTCTGTCATTGTCGTAGGACCCTCACTTTCATTACATCGATGTGGATTGCCTCGCGAAATAGCAATAGAGCTTTTCCAGACATTTGTAATTCGTGGTCTAATTAGGCAACATCTTGCTTCAAACATAGGAGTTGCTAAGAGTAAAATTCGAGAAAAAGAGCCAATTGTATGGGGAATACTTCAGGAGGTTATGCGCGGACATCCTATATTGCTGAATAGAGCGCCTACTCTGCATAGATTAGGCATACAGGCATTCCAACCCATTTTAGTGGAAGGACGTGCTATTTGTTTACATCCATTAGTTCGTAAGGGATTCAATGCAGATTTTGATGGGGATCAAATGGCTGTTCATGTACCTTTATCGTTGGAGGCTCAAGCGGAGGCTCGTTTACTTATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATCGGAGATCCCATTTCCGTACCAACTCAAGATATGCTTATGGGGCTCTATGTATTAACAAGCGGGAATCGTCGAGGTATTTGCGCAAATAGGTATAATCCGTTTAATTGCAGAAATTTTCAAAATGAAAAAATTGACGCTAATGCTAATAAGGATAAGTATATAAAAGAACCCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGCCAGAAAAGAATCAATTTAGAGAGCCCCTTGTGGCTTCGGTGGCAACTAGATCAAGGCCTTATTGCTTCAAGAGAAGCTCCCATCGAAGGTCACTTTGGATCTTTAGGTACCTATCATGAGATTTATGGACACTATCTAATAGTAAGAAGTATAAAAAAAAAAATTCTTTCTATATACATTCGAACCACTGTTGGTCATATTTATCTTTATCGAGAAATCGAAGAAGCTATACAAGGGTTTTGCCAAGCCTGCTCAGACGGTACCTAA

Protein:   MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKQLEGLVYCDFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRELLADLDLRIILDYSSLEWKELGEEGPTGNEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWGILQEVMRGHPILLNRAPTLHRLGIQAFQPILVEGRAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTSGNRRGICANRYNPFNCRNFQNEKIDANANKDKYIKEPFFCNSYDAIGAYRQKRINLESPLWLRWQLDQGLIASREAPIEGHFGSLGTYHEIYGHYLIVRSIKKKILSIYIRTTVGHIYLYREIEEAIQGFCQACSDGT